Research overview

My research is in Natural Language Processing and Machine Learning, with an emphasis on applications in health.

Working in the domain of health naturally motivates the methodological problems that I have worked on. For example, these include: model interpretability; learning with limited supervision from diverse sources; human-in-the-loop/hybrid systems; and trustworthiness of model outputs. For more details, see recent publications here.

On the applications side, one thread of my research concerns developing language technologies to automate (or semi-automate) biomedical evidence synthesis. Here is an episode of the NLP highlights podcast in which I discuss this work, here is a (brief) talk I gave at SciNLP 2020, and here is an article written for a lay audience about the effort. Elsewhere, I have worked on models for processing notes in Electronic Health Records.

A random sample of recentish publications

Iain J. Marshall, Benjamin Nye, Joël Kuiper, Anna Noel-Storr, Rachel Marshall, Rory Maclean, Frank Soboczenski, Ani Nenkova, James Thomas, and Byron C. Wallace. Trialstreamer: a living, automatically updated database of clinical trial reports Journal of American Medical Informatics Association; 2020.

Babak Esmaeili, Hongyi Huang, Byron C. Wallace, and Jan-Willem van de Meent. Structured Representations for Reviews: Aspect-Based Variational Hidden Factor Models AISTATS; 2019.

Jay DeYoung and Eric Lehman and Benjamin Nye and Iain Marshall and Byron C. Wallace. Evidence Inference 2.0: More Data, Better Models BioNLP ; 2020.

News

03/18/2021 Student Paper Award @ AMIA Summits

Our paper — led by my PhD student Ben Nye — received the best student-led paper award at the AMIA (Virtual) Summits

01/20/2021 Lutron Award

I received the 2021 Joel and Ruth Spira Excellence in Teaching Award for the Khoury College of Computer Sciences

08/15/2019 NIH/NLM R01 Renewed

The NIH has renewed the R01 grant that supports our work on RobotReviewer and related methods!

06/24/2019 NSF Grant

The NSF has awarded Jan-Willem van de Meent and I a grant to study disentangled representations for text!

Support

My work has been supported with grants from the National Institutes of Health, National Science Foundation (including a CAREER grant), the Army Research Office, Seton hospital, Amazon and seed funds from Brown University.